Insertion junction: CLIP2.006228_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006228
Chromosome:chromosome 9
Location:1604688
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g398700 CFA2,CPLD27 (1 of 1) 2.1.1.140 - (S)-coclaurine-N-methyltransferase; coclaurine N-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTGCTCCAGCGACTCCCGCGGCGAGCGGTAGAGGCAGGAGGAGTACT
Internal bar code:ATATGGGAACGGACGTGAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:112
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACTACGAGGTGTGTGTG
Suggested primer 2:CTCTCCGTCAATGAACGCCT