Insertion junction: CLIP2.006230_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006230
Chromosome:chromosome 17
Location:3820299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727250 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCGCCTGCGTGGCGCCGGTGTAGCGATAGTAATGCGCATCTTGACAG
Internal bar code:TTCCGCGTCGGTTTGGGTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2775
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GACATTCGGCATAGCGGAGA
Suggested primer 2:TCGAATCGCTGTATCTGGGC