Insertion junction: CLIP2.006238_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006238
Chromosome:chromosome 16
Location:517610
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692650 CGL4 Conserved in the Green Lineage; (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACGCGATGAAGCCCACAGCCACAGCCGGAAGGAGCTTGGTGCCGCTC
Internal bar code:GGGATATTAACAAGCTGGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:967
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CACGAGATCAGCTCCGAGTC
Suggested primer 2:TTTGAGTTGCAGCTGCGAAC