Insertion junction: CLIP2.006238_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006238
Chromosome:chromosome 16
Location:517613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692650 CGL4 Conserved in the Green Lineage; (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCGTGGCTGTGGCCATTACCTGTGGCCATCACCTGTGGCCATTACC
Internal bar code:TGAATTGAGCGGGTCCTATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4090
LEAP-Seq percent confirming:96.0396
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGAGTTGCAGCTGCGAAC
Suggested primer 2:CACGAGATCAGCTCCGAGTC