Insertion junction: CLIP2.006239_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006239
Chromosome:chromosome 17
Location:773830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701250 FLA12,PF8,CCDC39,FAP59 Flagellar Associated Protein 59; (1 of 1) PTHR18962//PTHR18962:SF0 - FAMILY NOT NAMED // COILED-COIL DOMAIN-CONTAINING PROTEIN 39 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGTATTTGTGACTTGACTTGTCGTGATGGTGGTGGTCTTGACGTGA
Internal bar code:CGATGTGGGTCGTAAGGAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1575
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGACGTGTTGACCGTTA
Suggested primer 2:TACACCGCACCAACTGACTC