Insertion junction: CLIP2.006240_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006240
Chromosome:chromosome 17
Location:1664488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707950 HEP2 Hsp70 escorting protein 2, chloroplast; (1 of 1) PTHR20922//PTHR20922:SF15 - UNCHARACTERIZED // A_TM021B04.14 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCTGCATCTTCCTCCCTAGCTCTACAAAACAGCAGTGGCAACGTCTC
Internal bar code:TAAGGATGAGAGGGAGAAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2838
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAACATGTCACCTGCAC
Suggested primer 2:GGTGGCCATAGAGCAGTGTT