Insertion junction: CLIP2.006240_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006240
Chromosome:chromosome 17
Location:1664521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707950 HEP2 Hsp70 escorting protein 2, chloroplast; (1 of 1) PTHR20922//PTHR20922:SF15 - UNCHARACTERIZED // A_TM021B04.14 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATGTCTGCGTGGAAAGCCCAGCGAAGGTCCGAAGGCACAAGGGTATG
Internal bar code:GATCCAAGGGATCAAACCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:895
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGCCATAGAGCAGTGTT
Suggested primer 2:CAGCAACATGTCACCTGCAC