Insertion junction: CLIP2.006241_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006241
Chromosome:chromosome 3
Location:4569898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176350 PLAP5,PLP5 (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin); Plastid lipid associated protein 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGAGGCAGAGCGCGAGAAAGCCCCTGTAAAGGGGCAGCAGGCTGCAT
Internal bar code:TGTCTGTTAGGTAAGTCAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1483
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TAACTGACGTGTGGGTCTGC
Suggested primer 2:TCTCCCCACCATCTCGTCAT