Insertion junction: CLIP2.006244_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006244
Chromosome:chromosome 14
Location:1486123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617600 DEG9 Deg protease; (1 of 4) PTHR22939//PTHR22939:SF83 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 2, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCTACAGTTGTCGACACCGCATCGGGCCCACCCCAGTCAGTCGGCCC
Internal bar code:TGGAGGTTCCGGAGAAGTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1483
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCGCCTGAACACTAGTTT
Suggested primer 2:CACAGCCTGAAGGACCGAAT