Insertion junction: CLIP2.006252_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006252
Chromosome:chromosome 10
Location:3250756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442650 (1 of 1) PTHR10887:SF366 - DNA-BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGTGCGCAGCCTTGGGCCGGCCGGTCTTCCACGAGTTGTAATGATGT
Internal bar code:GATGTGTAGTGTTAGCCGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3247
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCAACACCCCACCTCAC
Suggested primer 2:GACCGGTAGTATGGCTGCTC