Insertion junction: CLIP2.006255_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006255
Chromosome:chromosome 1
Location:8124565
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g065822 FAP80,IFT122 (1 of 54) IPR001680//IPR017986 - WD40 repeat // WD40-repeat-containing domain; Intraflagellar Transport Protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCTGCTGTTGTTACTTCAGGCTGTGGGTTGAATTGTGGATGCCGCGG
Internal bar code:GTAATATTCTCTGTGACGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:763
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACCAGTCACCGGCTCAA
Suggested primer 2:CGGGCACAAATTGGGACATG