Insertion junction: CLIP2.006258_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006258
Chromosome:chromosome 9
Location:6406695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414750 ELG33 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 33 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACGCCCACTTGCCGTCCCACGTCTGCACGGCCCCAGCAGGTTCCAG
Internal bar code:GCTCGTTGAACGAACGTATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3566
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:140
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:140

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTAACACCTCTGCCTG
Suggested primer 2:TGCTCACGCTTTTGTTTGCA