Insertion junction: CLIP2.006268_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006268
Chromosome:chromosome 3
Location:3417966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166750 PTK3 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa; Putative tyrosine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAGGCGGGGTGGCGGTGATGCCCGCTATGCCCGAAGGAAGTGCGCGC
Internal bar code:CAAAAGCTGTTTTGTGATTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2579
LEAP-Seq percent confirming:87.8049
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTCACAGATCTCCGACT
Suggested primer 2:CTGACACACTGCCATCCACT