Insertion junction: CLIP2.006269_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006269
Chromosome:chromosome 7
Location:246476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313800 CGL138 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTCTGTTGCGAGCGCGTGTGCGTCACCGACAAATTGGTGGCCAAGGT
Internal bar code:CTCTGCGTCCTCGGCTGTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4744
LEAP-Seq percent confirming:92.7711
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGCTACTGCTACTGGTG
Suggested primer 2:CCCTGTCTGCTTAAGCTGCT