Insertion junction: CLIP2.006284_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006284
Chromosome:chromosome 4
Location:1773909
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g211850 ELI5,ELIP5 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGCCGGAGGGTCGCTTACAGCAGGGCGGCGCCGCCGCGCAGGAACTG
Internal bar code:TACGTGAGCAGGGGTATCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1185
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCAACTTCTCCTGCCTG
Suggested primer 2:GCTGTGAACACCTCTCGACA