Insertion junction: CLIP2.006286_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006286
Chromosome:chromosome 6
Location:8308377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307150 AMB1,AMYB1 Beta-amylase 1; (1 of 3) 3.2.1.2 - Beta-amylase / Saccharogen amylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGTATAATGGCGCGCGTCGGTGCCAGTACCCACTCATGTCCGCCGTG
Internal bar code:GTCAACCTCCTTAGGATTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:868
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTGCAGTACACGGATTT
Suggested primer 2:GTGTGTCCTGTGGCCTAGAC