Insertion junction: CLIP2.006286_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006286
Chromosome:chromosome 6
Location:8308379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307150 AMB1,AMYB1 Beta-amylase 1; (1 of 3) 3.2.1.2 - Beta-amylase / Saccharogen amylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCCTGACAAAATATAAACAATTCTTGTAAGCTTTTGTCGTTTCTTGT
Internal bar code:GTCAACCTCCTTAGGATTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4869
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTCCTGTGGCCTAGAC
Suggested primer 2:CCCCTGCAGTACACGGATTT