Insertion junction: CLIP2.006297_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006297
Chromosome:chromosome 3
Location:5978721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189300 PLAP10,PLP10 (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin); Plastid lipid associated protein 10 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGAGCAGGGCGCCGCTGGGGGCTACATTGTGCCGTCGCCTGACGTGC
Internal bar code:GCAGGGGTAGAATAATTATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:363
LEAP-Seq percent confirming:52.7778
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGTTTGGAGGGATGGGG
Suggested primer 2:TAACTTCGCCTCGTTGCTGT