Insertion junction: CLIP2.006304_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006304
Chromosome:chromosome 3
Location:2557201
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159851 (1 of 2) IPR001623//IPR002110//IPR020683 - DnaJ domain // Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGTACACAGGCATCCCGACAAGTTCGGCGCGCGGTTTGGCGCGCGGT
Internal bar code:GTTAAATGCTTCCGCGTGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1112
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCACTCAAGGACTCCGG
Suggested primer 2:GCGTACGATATGCAGTGGGA