Insertion junction: CLIP2.006305_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006305
Chromosome:chromosome 17
Location:4485050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731100 CPL14 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358); Conserved in the Plant Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAAACACGCTACAAACATCTTGTGCACCATTGTGTTCCATGTCTGGA
Internal bar code:AAGGGAAATGGTTGATTACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3687
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCCACCTTCACTTGCAG
Suggested primer 2:ACTGAGCGAGTGTGTGTCTG