Insertion junction: CLIP2.006306_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006306
Chromosome:chromosome 17
Location:3048526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720100 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTGCAGCTGCATAAGCGAGGGGTGGGTGGGTGCGAACACACACACAC
Internal bar code:TTCGGCAGAGTATAAATGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2029
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGACCATCTGCAGCAAG
Suggested primer 2:GCCACCAAATCCCCAACAAC