Insertion junction: CLIP2.006309_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006309
Chromosome:chromosome 3
Location:737798
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145987 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCAGCGCATCAATTTACGCGTGCGTGCTGTCGTTCCGGTCGCCGTG
Internal bar code:GCTAATATACATGAGGAACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1318
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGAGGAGAGGGACCAG
Suggested primer 2:AACAGTACCAGCAGACACCG