Insertion junction: CLIP2.006310_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006310
Chromosome:chromosome 12
Location:422145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g495100 PSR1 (1 of 1) PF00249//PF14379 - Myb-like DNA-binding domain (Myb_DNA-binding) // MYB-CC type transfactor, LHEQLE motif (Myb_CC_LHEQLE); Phosphorus starvation response 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAAAGGTTGCATGAGAGTCCGGCGGCCGCTTTGCGACGAGTTGCCAG
Internal bar code:TGAGCTCTGGCGCGGCGGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1619
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCAATGTTATTCGGCCG
Suggested primer 2:TAGCAGGTGTGTTAGGCAGC