Insertion junction: CLIP2.006313_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006313
Chromosome:chromosome 1
Location:4888194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034050 (1 of 1) PTHR11751:SF428 - PROTEIN NKAT-1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTGCCCGCGCTGCCCAGCCGCACGCAGCGCTCCTTCATGCCCGGCAG
Internal bar code:TGCGGCTTGGAAAGGGTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1149
LEAP-Seq percent confirming:88.0952
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGACGTGCTTCTCCAAC
Suggested primer 2:GAGGGGGAGTCCAAATGCAA