Insertion junction: CLIP2.006315_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006315
Chromosome:chromosome 7
Location:3503159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336150 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACTGCATAGCTGCTGCCGCCGCCGCTGCCCCCGCCGCCCGCTGTCG
Internal bar code:TTCACCATGCAGTGTCGGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1462
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TATTGTGGGAAGGCTGCTGG
Suggested primer 2:CAAGTCAGCAACACCAGTGC