Insertion junction: CLIP2.006321_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006321
Chromosome:chromosome 17
Location:2886742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718950 RCA2 (1 of 4) IPR003959//IPR027417 - ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; RuBisCO activase-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCACCCACCCGCGCACGATACAGGTTCCGGCACCAGCCGCTGGACT
Internal bar code:TGAAAAGCTTGTCACTGATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:482
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGCGTGTACGTATGCATA
Suggested primer 2:CAGTACGTAAGCTGCGGGAT