Insertion junction: CLIP2.006323_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006323
Chromosome:chromosome 6
Location:6636449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294750 CHLG1,CHLG Chlorophyll synthetase; (1 of 1) 2.5.1.62 - Chlorophyll synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCCGTTCCACAATACCGCACTTCCGTGGCGAAATGCGCGTTCTGCC
Internal bar code:GATCTCTTAAGAGAGGGACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1522
LEAP-Seq percent confirming:43.1034
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGAAGTGAGAGCGAGTT
Suggested primer 2:ACTGCTCCAATTAAGCCCCC