Insertion junction: CLIP2.006330_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006330
Chromosome:chromosome 1
Location:5739192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041100 HLM3 (1 of 1) PTHR12197:SF75 - HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2; Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCAGCTCGTAATCGGCCTGACACCCCCACTCCAGACGTAACGGCCACC
Internal bar code:TTATCTCGTGTAGTATACGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1206
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTTGAACAAAGGGCTGT
Suggested primer 2:CAGATACGAAGCGTGCATGC