Insertion junction: CLIP2.006330_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006330
Chromosome:chromosome 13
Location:1407506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571950 (1 of 1) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTCCAGCCAGCCCTCCCCTTCCTTCCCTCCCTCCCCTCTGGTACCCG
Internal bar code:GTTTGGAGATAATGAAATAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1551
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCCTAACATGCAGCACA
Suggested primer 2:CTCGGTTTCTCTGGGTTCCC