Insertion junction: CLIP2.006337_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006337
Chromosome:chromosome 2
Location:2558176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092550 TPR1 (1 of 1) 6.2.1.4 - Succinate--CoA ligase (GDP-forming) / Succinyl-CoA synthetase (GDP-forming); Tetratricopeptide-repeat protein 1 5'UTR
Cre02.g092600 CPX2 Coproporphyrinogen III oxidase; (1 of 1) PTHR10755//PTHR10755:SF3 - COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTTAGAGCAAACAAGGATGCCTATGGGCAGAACTGGCAAAATGCGCTG
Internal bar code:ATGGGGACGGGTGGAAGGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1659
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AACAACAAACTTCCGCTCGC
Suggested primer 2:GGGGTCATTTTCCTCTGGGG