Insertion junction: CLIP2.006337_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006337
Chromosome:chromosome 9
Location:2175396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395550 (1 of 1) PF05991 - YacP-like NYN domain (NYN_YacP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATGCGCTCGCTAGTAGTCACCCGCGCGCTACTCCAGCAGGCCTGCAT
Internal bar code:CTAGACACGTGGCAGGCCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2256
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGAAGGGGAAGAGGAG
Suggested primer 2:TCACCTGCTCGTGATGGAAC