Insertion junction: CLIP2.006344_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006344
Chromosome:chromosome 12
Location:5393203
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g529200 (1 of 1) PF13917 - Zinc knuckle (zf-CCHC_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTCGCCTTCGTCGTCCTCGTCCTCCTCGTCGGACGACTCGTCCAGCA
Internal bar code:TTAAGTATGATTGGCACCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1003
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACACAACGAGCAAACCG
Suggested primer 2:CTAAGTAGTCCTGAGCGGCG