Insertion junction: CLIP2.006346_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006346
Chromosome:chromosome 2
Location:2979166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095350 DNK1,CGL116 Conserved in the Green Lineage; (1 of 1) PTHR10513 - DEOXYNUCLEOSIDE KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTTGAACGTGCCGGGCGTGCCAGGGTGTCAACCCGCCTTGCCCCTGC
Internal bar code:ATGATATTTGTCAATTCGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:752
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCTCCGCTATTTTCGC
Suggested primer 2:CTAGCCATCTACGACGCCTG