Insertion junction: CLIP2.006346_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006346
Chromosome:chromosome 2
Location:2979166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095350 DNK1,CGL116 Conserved in the Green Lineage; (1 of 1) PTHR10513 - DEOXYNUCLEOSIDE KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAGAACACAGTCCACGCCCACCACCCTCATCACCAGCCCTCTCCCTC
Internal bar code:GACGGACAGTTACCTAGATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:59
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCCATCTACGACGCCTG
Suggested primer 2:CTGTGCTCCGCTATTTTCGC