Insertion junction: CLIP2.006351_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006351
Chromosome:chromosome 13
Location:2434450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579550 CGL27 Conserved in the Green Lineage; (1 of 5) IPR002645 - STAS domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATATCAACACGCATGCTCTTGACAGGAGCGTCTTGCGGAGCTGGAGAC
Internal bar code:GGTTATATTAACTGCCTGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCGCTCCCACAAAAAG
Suggested primer 2:TCTTCAAGCAGCTGGACTCG