Insertion junction: CLIP2.006351_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006351
Chromosome:chromosome 13
Location:2434468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579550 CGL27 Conserved in the Green Lineage; (1 of 5) IPR002645 - STAS domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGGGTGAGGTGGTGATTTTGATGAAGCGCCGTGTCCGCCGCTGCTG
Internal bar code:GGTTATATTAACTGCCTGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:248
LEAP-Seq percent confirming:26.3158
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCAAGCAGCTGGACTCG
Suggested primer 2:CACACCGCTCCCACAAAAAG