Insertion junction: CLIP2.006359_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006359
Chromosome:chromosome 3
Location:5195029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181500 DPE1,STA11 Disproportionating enzyme 1; (1 of 1) PTHR32438:SF5 - 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGGGGCACCAGCGGCAGCAGCTGCCAGCACTGCATGCCGTGGTCGGC
Internal bar code:CCCTGCAGACAGGACTCTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1529
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGAGCGCGTGTACATG
Suggested primer 2:GTCGCCGATGAGTTTGATGC