Insertion junction: CLIP2.006362_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006362
Chromosome:chromosome 11
Location:1061137
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g467669 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTATCATGGCTCTGAGATGCGATATGACACTATCATAATAGTGAGGC
Internal bar code:AGTTCAATTCGGAATCAGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:492
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTTGGTTCAGTGGCAAG
Suggested primer 2:AGTTACGCATACGAGCCTGG