Insertion junction: CLIP2.006362_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006362
Chromosome:chromosome 12
Location:1594997
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g487100 TSM2 Methionyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF89 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // METHIONYL-TRNA SYNTHETASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGACCCCAGCCCCTACCTACCCGTCGCCCCACCAAGCCGTCCCGTGC
Internal bar code:GCATTCGTTACTACTGATAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:177
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCTTTCCCATCCCCAC
Suggested primer 2:GTCGCTGGTTTCTTCCTGGA