Insertion junction: CLIP2.006365_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006365
Chromosome:chromosome 4
Location:1774699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g211850 ELI5,ELIP5 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTCGACAGAATCAGGCCGCCAGGGCACACGTGACCTGCCCCCAGGAC
Internal bar code:CGAGTTATCCCTCAACTAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4008
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGTATCAGCTGAGTCCC
Suggested primer 2:AGAAGATCAACGGCCGTGTT