Insertion junction: CLIP2.006367_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006367
Chromosome:chromosome 3
Location:2302579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157800 TRXL1,TRL6,TRX2 (1 of 1) PTHR10438:SF227 - THIOREDOXIN-LIKE 2-1, CHLOROPLASTIC-RELATED; Thioredoxin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAACTTGCCCACGCAGGCTCAAAGCAAAATAAGAACACCGCCTCAATC
Internal bar code:GGCATATCTAGCGGATGGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3193
LEAP-Seq percent confirming:98.7342
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCATGGAGATGAGAGGA
Suggested primer 2:TTCCTGTTGGTGTTGCCCTT