Insertion junction: CLIP2.006370_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006370
Chromosome:chromosome 6
Location:2021520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265550 CDPK12 (1 of 1) PF07714//PF13202 - Protein tyrosine kinase (Pkinase_Tyr) // EF hand (EF-hand_5); Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGTTGCGGTTGGTTTGACAAGGAGCCAGGAGGAGTTGTGAGTGAGGC
Internal bar code:GCCTCTCATACCATCGTCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:5492
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGGTAGGTGATGGTGG
Suggested primer 2:AAATGAACGCAGCCAACACC