Insertion junction: CLIP2.006381_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006381
Chromosome:chromosome 4
Location:3772652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00096397

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAGGATGGCTCTGTGGTGCTAGGAGCTGTGCTGGATTGATGTAGCGG
Internal bar code:ACTAGTATTGGGGGGGAAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4060
LEAP-Seq percent confirming:81.3953
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGTACACCCCAAGCAT
Suggested primer 2:GGTTGAAACAACATGGGGGC