Insertion junction: CLIP2.006381_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006381
Chromosome:chromosome 16
Location:518837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692650 CGL4 Conserved in the Green Lineage; (1 of 173) IPR029058 - Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCGCCAACGTGCCGGGCGTGACCAGCGGCAAGCTGCGCCTGGAGCC
Internal bar code:CATAGGGCAACATGGTTTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:95
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCGGAGCTGATCTCGTG
Suggested primer 2:CCAGCAAGGCCATCTACGAA