Insertion junction: CLIP2.006381_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006381
Chromosome:chromosome 16
Location:518842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692650 CGL4 Conserved in the Green Lineage; (1 of 173) IPR029058 - Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGCGCCTGCAGCAGCAGTGGCGGCGGCGGCGGAGGGAAGGACACACA
Internal bar code:AAGATCGACTATAGTAGCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:830
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAAGGCCATCTACGAA
Suggested primer 2:GACTCGGAGCTGATCTCGTG