Insertion junction: CLIP2.006389_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006389
Chromosome:chromosome 1
Location:5051742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035100 (1 of 1) 5.4.99.18 - 5-(carboxyamino)imidazole ribonucleotide mutase / N(5)-carboxyaminoimidazole ribonucleotide mutase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCACACAATCTCCCTTCTTCTCAACCCCACCAGTTGCCAGCCTCGGC
Internal bar code:AACCGTGCAACAACGGGGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1851
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTATGGTGCTGCTTGTGT
Suggested primer 2:CGAAATGATGAGTGCAGCGG