Insertion junction: CLIP2.006389_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006389
Chromosome:chromosome 1
Location:5051752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035100 (1 of 1) 5.4.99.18 - 5-(carboxyamino)imidazole ribonucleotide mutase / N(5)-carboxyaminoimidazole ribonucleotide mutase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCTGCTATCTTCGGCGGGGCGCATAACGGGGAATTCCCGTCGCAGAAC
Internal bar code:AACCGTGCAACAACGGGGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1594
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAATGATGAGTGCAGCGG
Suggested primer 2:TCGTATGGTGCTGCTTGTGT