Insertion junction: CLIP2.006390_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006390
Chromosome:chromosome 12
Location:3248572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499500 SAC3,SNRK2B snRK1 family in Chlamydomonas, subgroup 2; (1 of 1) PTHR24343:SF207 - SERINE/THREONINE-PROTEIN KINASE SRK2C CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATATCTTCACCAGCGGCCGCGGACTGGAGTCCAGCAGCGTGTTCTCC
Internal bar code:TAGCATCCCGGTTATCTCGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1957
LEAP-Seq percent confirming:62.9032
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGCATACTGACTCCTCG
Suggested primer 2:TTTGGAGATGGGCGCTGAAT