Insertion junction: CLIP2.006393_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006393
Chromosome:chromosome 6
Location:2053416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265800 PRPL28 Chloroplast ribosomal protein L28, imported to chloroplast; (1 of 1) PTHR13528//PTHR13528:SF5 - 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGGTAGTCGGCGAGCTCTCACAGCCTCCATCCCACAGCAATTTTCTT
Internal bar code:TAGAATATATGGTGTCGTAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3103
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTACTTGGGCTGCTTCTT
Suggested primer 2:ACGGAAATGCAAGTTGTGGC