Insertion junction: CLIP2.006393_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006393
Chromosome:chromosome 16
Location:518482
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g692650 CGL4 Conserved in the Green Lineage; (1 of 173) IPR029058 - Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCGACCTGCTGCTGCTGTTCCCTGACGCCCCTTGCTGCCCCTCTGC
Internal bar code:CGTTCTAAAAGTGGTCTGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:107
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGCCAAGAACTCGCTCA
Suggested primer 2:CGCAAAGACAGTGTGTGTGG